BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D12LP1|AL427318
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig797 1787 0.0
>3x_Contig797
Length = 3075
Score = 1787 bits (893), Expect = 0.0
Identities = 938/962 (97%), Gaps = 2/962 (0%)
Strand = Plus / Plus
Query: 1 ttctttattcctccataatcattatgrtctccatcgcttgtttcaatttctttggaatca 60
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1485 ttctttattcctcaataatcattatgatctccatcgcttgtttcaatttctttggaatca 1544
Query: 61 ctctaacnnnnnbcwtgamcgctacggtaagaagtactattgacacttgcagaaccttat 120
||||||| | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 ctctaaccaacagcatgaacgctacggtaagaagtactattgacacttgcagaaccttat 1604
Query: 121 tggtgtggttagtatcactttccctcggttgggaatcatttaagttgacacagtttaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 tggtgtggttagtatcactttccctcggttgggaatcatttaagttgacacagtttaatg 1664
Query: 181 gattcgtactattagttttgggtacgctattatttaacggtgcgatcacgatagataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 gattcgtactattagttttgggtacgctattatttaacggtgcgatcacgatagataaga 1724
Query: 241 aaaggctaccacaatggttgactaaagattatcccggagatgatcgtatcatcaatgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 aaaggctaccacaatggttgactaaagattatcccggagatgatcgtatcatcaatgtca 1784
Query: 301 ttgatgaagaagttgaaaggttctaaagatacagagaaggaatcattttctggctatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 ttgatgaagaagttgaaaggttctaaagatacagagaaggaatcattttctggctatttc 1844
Query: 361 acttttacatatacggatgtacaattgaaggnttacgtnaaataaaamamagaattcgat 420
||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||
Sbjct: 1845 acttttacatatacggatgtacaattgaaggattacgtaaaataaaaaaaagaattcgat 1904
Query: 421 aacaagttaataagtagaagcaaggmatcacagcgcgtgcctagcttggttagttgattt 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1905 aacaagttaataagtagaagcaaggaatcacagcgcgtgcctagcttggttagttgattt 1964
Query: 481 aaactaaaccattagtacgattggcagtgatcctctttatmttaggtagamagtcatttt 540
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 1965 aaactaaaccattagtacgattggcagtgatcctctttatattaggtagaaagtcatttt 2024
Query: 541 ttgcgttttagttttgattagaaggacaatgtgtgtcccacatgtgaagctcagtgtgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 ttgcgttttagttttgattagaaggacaatgtgtgtcccacatgtgaagctcagtgtgag 2084
Query: 601 cgaagtacggccagcmattgcmgacaaaacamaaccgttcgcmtcagagatagttacttc 660
||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||
Sbjct: 2085 cgaagtacggccagcaattgcagacaaaacaaaaccgttcgcatcagagatagttacttc 2144
Query: 661 accttagaatagcatatccaatgtacagcataaacacataccagctaagcatgcagtcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 accttagaatagcatatccaatgtacagcataaacacataccagctaagcatgcagtcaa 2204
Query: 721 acaatcagagttgttacgggattgagcaggttgctgcacatatattggctgttgttgctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 acaatcagagttgttacgggattgagcaggttgctgcacatatattggctgttgttgctg 2264
Query: 781 ttgcccgtaatagccctgctgaggagcaccctgttgatagtattgctgctgttgggggtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2265 ttgcccgtaatagccctgctgaggagcaccctgttgatagtattgctgctgtt-ggggtg 2323
Query: 841 gtgcttggttctggtattgatattgaggaggagattgttggtagtaactctgctgtggag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2324 gtgcttggttctggtattgatattgaggaggagattgttggtagtaactctgctgtggag 2383
Query: 901 ctgagaagaaccctcttttggctatcatcagcagctgaggsttggccttgagtggttggt 960
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2384 ctgagaagaaccctc-tttggctatcatcagcagctgaggcttggccttgagtggttggt 2442
Query: 961 gc 962
||
Sbjct: 2443 gc 2444
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6159
Number of Sequences: 1807
Number of extensions: 6159
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)